SNP Profiles matching GU 144 /C

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	GG	CC	CT	AC	CC	TT	CC	TT	AT	AA	CC	GG
1._GC-08-223-6-19	TT	AA	GG	CC	CT	AC	CC	TT	CC	TT	AT	AA	CC	GG
2._RUQ_1585	_	AA	GG	CC	_	_	_	TT	_	_	_	_	CT	GG
3._RUQ_1460	_	AA	GG	CC	_	_	_	TT	_	_	_	_	CT	GG
4._RUQ_1159	_	AA	GG	CC	_	_	_	TT	_	_	_	_	CC	GG
5._RUQ_436	_	AA	GG	CC	_	_	_	TT	_	_	_	_	CC	GG
6._RUQ_848	_	AA	GG	CC	_	_	_	TT	_	_	_	_	CT	GG
7._RUQ_1672	_	AA	GG	CC	_	_	_	TT	_	_	_	_	CC	GG
8._RUQ_44	_	AA	GG	CC	_	_	_	TT	_	_	_	_	CC	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	AA	CC	TT	CC	GG	GG	GG	TT	AC	CC	TT	TT	CC
1._GC-08-223-6-19	TT	AA	CC	TT	CC	GG	GG	GG	TT	AC	CC	TT	TT	CC
2._RUQ_1585	_	_	_	_	CC	GG	GG	_	TT	CC	CC	TT	TT	CC
3._RUQ_1460	_	_	_	_	CC	GG	GG	_	TT	CC	CC	TT	TT	CC
4._RUQ_1159	_	_	_	_	CC	GG	GG	_	TT	AA	CC	TT	-	CC
5._RUQ_436	_	_	_	_	CC	GG	GG	_	TT	AA	CC	TT	TT	CC
6._RUQ_848	_	_	_	_	CC	GG	GT	_	TT	AA	CC	TT	CT	CC
7._RUQ_1672	_	_	_	_	CC	GG	GG	_	TT	AA	CC	TT	TT	CC
8._RUQ_44	_	_	_	_	CC	GG	GG	_	TT	AA	CC	TT	-	CC

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	AA	GG	AA	CC	AA	CC	AC	GT	AC	AT	CG	X_X	X_X	X_X
1._GC-08-223-6-19	AA	GG	AA	CC	AA	CC	AC	GT	AC	AT	CG	X_X	X_X	X_X
2._RUQ_1585	AA	_	-	CC	AG	CC	AC	GT	AC	_	_	X_X	X_X	X_X
3._RUQ_1460	AA	_	-	CC	AG	CC	AC	GT	AC	_	_	X_X	X_X	X_X
4._RUQ_1159	AA	_	-	CC	AA	CC	AA	TT	AC	_	_	X_X	X_X	X_X
5._RUQ_436	AA	_	AA	CC	AA	CC	AA	TT	CC	_	_	X_X	X_X	X_X
6._RUQ_848	AA	_	AA	CC	AA	CC	AC	GT	AC	_	_	X_X	X_X	X_X
7._RUQ_1672	AA	_	AA	CC	AA	CC	AA	TT	CC	_	_	X_X	X_X	X_X
8._RUQ_44	AA	_	AA	CC	AA	CC	AA	TT	CC	_	_	X_X	X_X	X_X

Input profile: GU_144_/C

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Mars Center for Cocoa Science, Brazil

Location: 8619 1 > FP

Dapeng Zhang, 2016

1._GU_144_/C GC-08-223-6-19

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP2

2._CRU_104 RUQ_1585

93.2 %
22 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._CRU_111 RUQ_1460

93.2 %
22 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

4._N_38_[T38] RUQ_1159

92.9 %
21 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

5._B_12_/2_[POU] RUQ_436

91.3 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

6._IFC_5_[CIV] RUQ_848

91.3 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

7._M_8_[SUR] RUQ_1672

91.3 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

8._SC_9_[UNK] RUQ_44

90.9 %
22 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25